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LSFM (Light Sheet Fluorescent Microscopy)

This is a list of publications on the theory, design and applications of light sheet microscopy and similar techniques. We try to keep it up-to-date, but please email Susi (spower@morgridge.org) if a paper is missing.

2007 SPIM Publications

Arnaout, R., Ferrer, T., Huisken, J., Spitzer, K., Stainier, D. Y. R., Tristani-Firouzi, M., & Chi, N. C. (2007). Zebrafish model for human long QT syndrome. Proc. Natl. Acad. Sci. U. S. A., 104(27), 11316–11321. https://doi.org/10.1073/pnas.0702724104


Breuninger, T., Greger, K., & Stelzer, E. H. K. (2007). Lateral modulation boosts image quality in single plane illumination fluorescence microscopy. Opt. Lett., 32(13), 1938–1940.


Buytaert, J. A. N., & Dirckx, J. J. J. (2007). Design and quantitative resolution measurements of an optical virtual sectioning three-dimensional imaging technique for biomedical specimens, featuring two-micrometer slicing resolution. J. Biomed. Opt., 12(1), 14039. https://doi.org/10.1117/1.2671712


Dodt, H.-U., Leischner, U., Schierloh, A., Jährling, N., Mauch, C. P., Deininger, K., … Becker, K. (2007). Ultramicroscopy: three-dimensional visualization of neuronal networks in the whole mouse brain. Nat. Methods, 4(4), 331–336. https://doi.org/10.1038/nmeth1036


Engelbrecht, C. J., Greger, K., Reynaud, E. G., Krzic, U., Colombelli, J., & Stelzer, E. H. (2007). Three-dimensional laser microsurgery in light-sheet based microscopy (SPIM). Opt. Express, 15(10), 6420–6430.


Greger, K., Swoger, J., & Stelzer, E. H. K. (2007). Basic building units and properties of a fluorescence single plane illumination microscope. Rev. Sci. Instrum., 78(2), 23705.


Huisken, J., & Stainier, D. Y. R. (2007). Even fluorescence excitation by multidirectional selective plane illumination microscopy (mSPIM). Opt. Lett., 32(17), 2608–2610.


Keller, P. J., Pampaloni, F., & Stelzer, E. H. K. (2007). Three-dimensional preparation and imaging reveal intrinsic microtubule properties. Nat. Methods, 4(10), 843–846. https://doi.org/10.1038/nmeth1087


Pampaloni, F., Reynaud, E. G., & Stelzer, E. H. K. (2007). The third dimension bridges the gap between cell culture and live tissue. Nat. Rev. Mol. Cell Biol., 8(10), 839–845. https://doi.org/10.1038/nrm2236


Renaud, O., Heintzmann, R., Sáez-Cirión, A., & Schnelle, T. (2007). A system and methodology for high-content visual screening of individual intact living cells in \ldots. Proc. SPIE. Retrieved from http://link.aip.org/link/?PSISDG/6441/64410Q/1


Swoger, J., Verveer, P., Greger, K., Huisken, J., & Stelzer, E. H. K. (2007). Multi-view image fusion improves resolution in three-dimensional microscopy. Opt. Express, 15(13), 8029–8042.


Verveer, P. J., Swoger, J., Pampaloni, F., Greger, K., Marcello, M., & Stelzer, E. H. K. (2007). High-resolution three-dimensional imaging of large specimens with light sheet-based microscopy. Nat. Methods, 4(4), 311–313. https://doi.org/10.1038/nmeth1017


Wein, W., Blume, M., Leischner, U., Dodt, H.-U., & Navab, N. (2007). Quality-based registration and reconstruction of optical tomography volumes. Med. Image Comput. Comput. Assist. Interv., 10(Pt 2), 718–725.